Research Interests
Cheminformatics (aka chemoinformatics); data mining public chemical and biological information; searching and mining chemistry journal articles and documents; small molecule bioinformatics; cyberinfrastructure; grids and web services; aggregation of and human interaction with chemical information; Web 2.0 and Semantic Web for cheminformatics. More Details...
Latest Publications
Journal Articles & Conference Papers
- Hur, J. and Wild, D.J. PubChemSR: A search and retrieval tool for PubChem, Chemistry Central Journal, 2008, 2, 11.
- Willighagen, E., O'Boyle, N.M., Gopalakrishnan H., Jiao, D., Guha, R., Steinbeck, C. and Wild, D.J. Userscripts for the Life Sciences, BMC Bioinformatics, 2007, 8, 487.
- Guha, R., Wiggins, G.D., Wild, D.J., Baik, M.H., Pierce, M.E., and Fox, G.C. Improving usability and accessibility of cheminformatics tools for chemists through cyberinfrastructure and education, Cheminformatics, Accepted September 2007.
- Wang, H., Klinginsmith, J., Dong, X., Lee, A.C., Guha, R., Wu,
Y., Crippen, G.M., and Wild, D.J. Chemical Data Mining of the NCI Human Tumor Cell Line Database, Journal of Chemical Information and Modeling, 2007; 47(6), 2063-2076.
- Dong, X., Gilbert, K.E., Guha, R., Heiland, R., Kim, J., Pierce, M.E. Pierce, Fox, G.C. and Wild, D.J. Web service infrastructure for chemoinformatics, Journal of Chemical Information and Modeling, 2007; 47(4) pp 1303-1307.
- Guha, R., Dutta, D., Wild, D.J., Chen, T. Counting Clusters using R-NN Curves. Journal of Chemical Information and Modeling, 2007; 47(4) pp 1308-1318
- Dutta, D., Guha, R., Wild, D., and Chen, T. Ensemble Feature Selection: Consistent Descriptor Subsets for Multiple QSAR Models, Journal of Chemical Information and Modeling, 2007; 47(3), pp 989 - 997
- Wild, D.J.. Strategies for Using Information Effectively in Early-stage Drug Discovery, in Ekins, S. (ed), Computer Applications in Pharmaceutical Research and Development. Wiley-Interscience, Hoboken, 2006.
- Wild, D.J. and Wiggins, G.D. Challenges for chemoinformatics education in drug discovery. Drug Discovery Today, 11, 9&10 (May 2006), pp436-439
- Wild, D.J. and Wiggins, D. Videoconferencing and Other Distance Education Techniques in Chemoinformatics Teaching and Research at Indiana University. Journal of Chemical Information & Modeling 2006; 46(2) pp 495 - 502
Books and Book Chapters
- Wild, D.J. and Beckman, R. The future of chemical information searching. In Banville, D. (ed). Mining Chemical Information from the Scientific Literature. Submitted.
- Shankar, K., Wild, D.J., An, J., Narayanan, S., Shoulders, S. Information technology in times of crisis: Considering knowledge management for disaster management. In E. Bolisani (Ed.) Building the Knowledge Society on the Internet: Sharing and Exchanging Knowledge in Networked Environments. IGI Global, Hershey, 2008.
- Wild, D.J. Strategies for Using Information Effectively in Early-stage Drug Discovery, in Ekins, S. (ed), Computer Applications in Pharmaceutical Research and Development. Wiley-Interscience, Hoboken, 2006.
Presentations & Conference Sessions
- Upcoming: 19th Bicentennial Conference on Chemical Education, July 2008, Bloomington Indiana. Symposium chair for Advanced Informatics in Chemistry Education.
- Upcoming: 8th International Conference on Chemical Structures, June 1-5 2008, Noordwijkerhout, Netherlands. Presentation: An infrastructure for data mining public chemical & biological information. Abstract Submitted.
- Upcoming: American Chemical Society 235th National Meeting, April 6-10 2008, New Orleans. Presentation: Developing a cheminformatics research and teaching center for the Web 2.0 world
- 4th Joint Conference on Chemoinformatics, June 2007, Sheffield, U.K. Organizing Committee Member. Session chair for clustering session. Presentation: A web service infrastructure for chemoinformatics
- CERMACS 2007, May 2007, Covington, KY. Presentation: A web service infrastructure for cheminformatics,
- University of Michigan Bioinformatics Seminar Series, March 2007, Ann Arbor, Mich. Presentation: Smart Mining of Drug Discovery Information and the Emerging Field of Chemoinformatics, (video available)
- American Chemical Society 233rd National Meeting, March 2007, Chicago. Organizer of Advanced Mining of Life Science Information Symposium. Presentation: Integrating text and literature sources with traditional chemoinformatics tools
- American Chemical Society 232nd National Meeting, September 2006, San Francisco. Presentation: Advanced HTS data mining using web service workflows
- Microsoft eScience Workshop, April 2006, John Hopkins University. Presentation: An agent-based chemistry mining tool for drug discovery
